Describe the main difference between a polypeptide chain and a protein.

AQA A-Level Biology (7402) — 3.1 Biological Molecules · Describe · 4 marks · View as Markdown

Written & reviewed by James Millett — Biology (Imperial College London), PGCE Science (University of Cambridge).

Model answer (4 marks)

A polypeptide chain is a linear sequence of amino acids linked by peptide bonds.
A protein is a polypeptide that has folded into a specific three‑dimensional structure and performs a biological function.
The main difference is that a protein has a defined tertiary (and often quaternary) structure, whereas a polypeptide chain is just the amino‑acid sequence.
This structure determines the protein’s function, allowing it to act as an enzyme, structural component, signal molecule, etc.

Examiner tips

  • Use the words ‘polypeptide chain’ and ‘protein’ exactly as defined; mention folding and function; keep answer to 4 short points.
  • Show the link between structure and function to secure the functional significance mark.

Common mistakes

  • Confusing a polypeptide with a protein and vice versa; not mentioning folding; ignoring the functional aspect of the difference.

Mark scheme (4 marks)

  1. Understanding of the definition of a polypeptide chain
  2. Understanding of the definition of a protein
  3. Explanation of the main difference between a polypeptide chain and a protein
  4. Understanding of the functional significance of the difference

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